No. words: 1030; after pruning: 1004


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 9.0 (1,1:470)  444  0.00 0.42 0.21  BE443288Ta21P052H02P003D081F1_023.ab1        1   471 (47)  C BE443288Ta21P052H02P003D081R1_023.ab1   (40)   472     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  228 nodes

 116 str. conn. components

Path
    1  C BE443288Ta21P052H02P003D081R1_023.ab1   512 
  106    BE443288Ta21P052H02P003D081F1_023.ab1    64 
  122  C BE443288Ta21P052H02P003D081R1_023.ab1   391 
  342    BE443288Ta21P052H02P003D081F1_023.ab1   300 
  450  C BE443288Ta21P052H02P003D081R1_023.ab1    63 
  466    BE443288Ta21P052H02P003D081F1_023.ab1   424 
Contig length: old 559, new 560

Contig length: old 560, new 560
New start: 0