No. words: 1033; after pruning: 1007


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    4    0.0 8.8 (1,1:469)  442  0.00 0.21 0.21  BE443288Ta23P052H02P003D081F1_019.ab1        5   470 (48)  C BE443288Ta23P052H02P003D081R1_019.ab1   (49)   466     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 4       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  228 nodes

 116 str. conn. components

Path
    1  C BE443288Ta23P052H02P003D081R1_019.ab1   515 
   65    BE443288Ta23P052H02P003D081F1_019.ab1    20 
   69  C BE443288Ta23P052H02P003D081R1_019.ab1   447 
   85    BE443288Ta23P052H02P003D081F1_019.ab1    39 
   89  C BE443288Ta23P052H02P003D081R1_019.ab1   427 
  165    BE443288Ta23P052H02P003D081F1_019.ab1   119 
  173  C BE443288Ta23P052H02P003D081R1_019.ab1   343 
  181    BE443288Ta23P052H02P003D081F1_019.ab1   135 
  221  C BE443288Ta23P052H02P003D081R1_019.ab1   295 
  249    BE443288Ta23P052H02P003D081F1_019.ab1   203 
  265  C BE443288Ta23P052H02P003D081R1_019.ab1   251 
  349    BE443288Ta23P052H02P003D081F1_019.ab1   303 
  357  C BE443288Ta23P052H02P003D081R1_019.ab1   159 
  365    BE443288Ta23P052H02P003D081F1_019.ab1   319 
  389  C BE443288Ta23P052H02P003D081R1_019.ab1   127 
  397    BE443288Ta23P052H02P003D081F1_019.ab1   351 
  449  C BE443288Ta23P052H02P003D081R1_019.ab1    67 
  469    BE443288Ta23P052H02P003D081F1_019.ab1   423 
Contig length: old 563, new 564

Contig length: old 564, new 564
New start: 0