No. words: 1019; after pruning: 979


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 8.7 (1,1:458)  420  1.31 0.22 0.22  BE443288Ta24P052H02P003D081F1_017.ab1        1   459 (45)  C BE443288Ta24P052H02P003D081R1_017.ab1   (56)   459     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  212 nodes

 108 str. conn. components

Path
    1  C BE443288Ta24P052H02P003D081R1_017.ab1   515 
   60    BE443288Ta24P052H02P003D081F1_017.ab1     4 
   72  C BE443288Ta24P052H02P003D081R1_017.ab1   444 
   81    BE443288Ta24P052H02P003D081F1_017.ab1    24 
   85  C BE443288Ta24P052H02P003D081R1_017.ab1   431 
  110    BE443288Ta24P052H02P003D081F1_017.ab1    53 
  122  C BE443288Ta24P052H02P003D081R1_017.ab1   394 
  166    BE443288Ta24P052H02P003D081F1_017.ab1   109 
  174  C BE443288Ta24P052H02P003D081R1_017.ab1   342 
  222    BE443288Ta24P052H02P003D081F1_017.ab1   165 
  242  C BE443288Ta24P052H02P003D081R1_017.ab1   274 
  278    BE443288Ta24P052H02P003D081F1_017.ab1   221 
Contig length: old 560, new 561

Contig length: old 561, new 561
New start: 0 
S Change at: 106; seg lengths: entry 1, contig 1