No. words: 1039; after pruning: 1013


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 10.2 (1,1:475)  449  0.21 0.21 0.21  BE443288Td03P052H02P003D081F1_011.ab1        1   476 (48)  C BE443288Td03P052H02P003D081R1_011.ab1   (39)   476     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  228 nodes

 116 str. conn. components

Path
    1  C BE443288Td03P052H02P003D081R1_011.ab1   515 
  142    BE443288Td03P052H02P003D081F1_011.ab1   102 
  154  C BE443288Td03P052H02P003D081R1_011.ab1   362 
  298    BE443288Td03P052H02P003D081F1_011.ab1   258 
  390  C BE443288Td03P052H02P003D081R1_011.ab1   126 
  394    BE443288Td03P052H02P003D081F1_011.ab1   354 
  462  C BE443288Td03P052H02P003D081R1_011.ab1    54 
  470    BE443288Td03P052H02P003D081F1_011.ab1   430 
Contig length: old 563, new 564

Contig length: old 564, new 564
New start: 0