No. words: 1031; after pruning: 1005


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    4    0.0 8.1 (1,1:470)  443  0.00 0.00 0.43  BE443288Td04P052H02P003D081F1_009.ab1        5   472 (47)  C BE443288Td04P052H02P003D081R1_009.ab1   (46)   466     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 4       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  230 nodes

 117 str. conn. components

Path
    1  C BE443288Td04P052H02P003D081R1_009.ab1   512 
  106    BE443288Td04P052H02P003D081F1_009.ab1    64 
  130  C BE443288Td04P052H02P003D081R1_009.ab1   383 
  338    BE443288Td04P052H02P003D081F1_009.ab1   296 
Contig length: old 560, new 561

Contig length: old 561, new 561
New start: 0