No. words: 1051; after pruning: 1025


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 9.4 (1,1:470)  440  0.21 0.42 0.21  BE443288Td09P052H02P003D081F1_016.ab1        1   471 (57)  C BE443288Td09P052H02P003D081R1_016.ab1   (51)   472     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  226 nodes

 115 str. conn. components

Path
    1  C BE443288Td09P052H02P003D081R1_016.ab1   523 
   73    BE443288Td09P052H02P003D081F1_016.ab1    21 
   77  C BE443288Td09P052H02P003D081R1_016.ab1   447 
   93    BE443288Td09P052H02P003D081F1_016.ab1    40 
   97  C BE443288Td09P052H02P003D081R1_016.ab1   427 
  113    BE443288Td09P052H02P003D081F1_016.ab1    60 
  117  C BE443288Td09P052H02P003D081R1_016.ab1   407 
  137    BE443288Td09P052H02P003D081F1_016.ab1    84 
  141  C BE443288Td09P052H02P003D081R1_016.ab1   383 
  193    BE443288Td09P052H02P003D081F1_016.ab1   140 
  249  C BE443288Td09P052H02P003D081R1_016.ab1   275 
  257    BE443288Td09P052H02P003D081F1_016.ab1   204 
  261  C BE443288Td09P052H02P003D081R1_016.ab1   263 
  265    BE443288Td09P052H02P003D081F1_016.ab1   212 
  289  C BE443288Td09P052H02P003D081R1_016.ab1   235 
  305    BE443288Td09P052H02P003D081F1_016.ab1   252 
  317  C BE443288Td09P052H02P003D081R1_016.ab1   207 
  357    BE443288Td09P052H02P003D081F1_016.ab1   304 
  381  C BE443288Td09P052H02P003D081R1_016.ab1   143 
  385    BE443288Td09P052H02P003D081F1_016.ab1   332 
  393  C BE443288Td09P052H02P003D081R1_016.ab1   131 
  401    BE443288Td09P052H02P003D081F1_016.ab1   348 
  417  C BE443288Td09P052H02P003D081R1_016.ab1   107 
  433    BE443288Td09P052H02P003D081F1_016.ab1   380 
  445  C BE443288Td09P052H02P003D081R1_016.ab1    79 
  449    BE443288Td09P052H02P003D081F1_016.ab1   396 
Contig length: old 580, new 581

Contig length: old 581, new 581
New start: 0