No. words: 1071; after pruning: 1045


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 8.2 (1,1:393)  385  0.25 0.00 0.00  BE443568Ld04P078F01P078F071F1_009.ab1        1   394 (149)  C BE443568Ld04P078F01P078F071R1_009.ab1   (134)   394     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  196 nodes

 100 str. conn. components

Path
    1  C BE443568Ld04P078F01P078F071R1_009.ab1   528 
  274    BE443568Ld04P078F01P078F071F1_009.ab1   140 
Contig length: old 677, new 677

Contig length: old 677, new 677
New start: 0