No. words: 1026; after pruning: 1000


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 8.1 (1,1:366)  362  0.00 0.00 0.00  BE443568Ld06P078F01P078F071F1_005.ab1        1   367 (150)  C BE443568Ld06P078F01P078F071R1_005.ab1   (142)   367     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  186 nodes

 95 str. conn. components

Path
    1  C BE443568Ld06P078F01P078F071R1_005.ab1   509 
  266    BE443568Ld06P078F01P078F071F1_005.ab1   124 
  358  C BE443568Ld06P078F01P078F071R1_005.ab1   152 
  366    BE443568Ld06P078F01P078F071F1_005.ab1   224 
Contig length: old 659, new 659

Contig length: old 659, new 659
New start: 0