No. words: 1090; after pruning: 1064


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    6    0.0 7.4 (1,1:381)  367  0.00 0.27 0.00  BE443568Ld08P078F01P078F071F1_001.ab1        1   376 (148)  C BE443568Ld08P078F01P078F071R1_001.ab1   (183)   383     7 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 6       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  186 nodes

 95 str. conn. components

Path
    1  C BE443568Ld08P078F01P078F071R1_001.ab1   566 
  278    BE443568Ld08P078F01P078F071F1_001.ab1    94 
  286  C BE443568Ld08P078F01P078F071R1_001.ab1   281 
  302    BE443568Ld08P078F01P078F071F1_001.ab1   118 
  330  C BE443568Ld08P078F01P078F071R1_001.ab1   237 
  338    BE443568Ld08P078F01P078F071F1_001.ab1   154 
  366  C BE443568Ld08P078F01P078F071R1_001.ab1   201 
  414    BE443568Ld08P078F01P078F071F1_001.ab1   230 
Contig length: old 708, new 708

Contig length: old 708, new 708
New start: 0