No. words: 1026; after pruning: 1000


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 8.0 (1,1:367)  360  0.27 0.00 0.00  BE443568Ld09P078F01P078F071F1_016.ab1        1   368 (149)  C BE443568Ld09P078F01P078F071R1_016.ab1   (141)   368     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  184 nodes

 94 str. conn. components

Path
    1  C BE443568Ld09P078F01P078F071R1_016.ab1   509 
  269    BE443568Ld09P078F01P078F071F1_016.ab1   128 
Contig length: old 658, new 658

Contig length: old 658, new 658
New start: 0