No. words: 509; after pruning: 469


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    

Pass: 3
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 4
             Gap  Score    
Merge:(0)    0   -0.8 -0.8 (1,1:336)  111  1.24 0.00 4.97  BE443568Ta12P095E02P078F071F1_006.ab1      179   339 (16)  C BE443568Ta12P095E02P078F071R1_006.ab1   (0)   154     2 *

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
-0.8       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  1       1 

Read equivalence class histogram:
    1    2

Chimera merges: 


Contig 1:  56 nodes

 30 str. conn. components

Path
    1    BE443568Ta12P095E02P078F071F1_006.ab1     1 
Contig length: old 355, new 355

Contig length: old 355, new 355
New start: 0