No. words: 501; after pruning: 461


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    

Pass: 3
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 4
             Gap  Score    
Merge:(0)    3   -1.4 -1.4 (1,1:332)  116  0.62 0.00 4.97  BE443568Ta13P095E02P078F071F1_003.ab1      170   330 (12)  C BE443568Ta13P095E02P078F071R1_003.ab1   (0)   159     7 *

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
-1.4       1        0

Gap   # merges  # failures
 size
 3       1        0

Offset
  0       1 

Read equivalence class histogram:
    1    2

Chimera merges: 


Contig 1:  58 nodes

 31 str. conn. components

Path
    1    BE443568Ta13P095E02P078F071F1_003.ab1     1 
  321  C BE443568Ta13P095E02P078F071R1_003.ab1    16 
  325    BE443568Ta13P095E02P078F071F1_003.ab1   325 
Contig length: old 342, new 342

Contig length: old 342, new 342
New start: 0