No. words: 1809; after pruning: 1783


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 15.7 (1,1:831)  797  0.12 0.12 0.24  BE443955Ld03P078G01P078G071F1_052.ab1        1   833 (50)  C BE443955Ld03P078G01P078G071R1_052.ab1   (94)   832     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  408 nodes

 206 str. conn. components

Path
    1  C BE443955Ld03P078G01P078G071R1_052.ab1   926 
  108    BE443955Ld03P078G01P078G071F1_052.ab1    13 
  144  C BE443955Ld03P078G01P078G071R1_052.ab1   783 
  154    BE443955Ld03P078G01P078G071F1_052.ab1    59 
  330  C BE443955Ld03P078G01P078G071R1_052.ab1   597 
  366    BE443955Ld03P078G01P078G071F1_052.ab1   271 
  562  C BE443955Ld03P078G01P078G071R1_052.ab1   365 
  602    BE443955Ld03P078G01P078G071F1_052.ab1   507 
  618  C BE443955Ld03P078G01P078G071R1_052.ab1   309 
  634    BE443955Ld03P078G01P078G071F1_052.ab1   539 
  714  C BE443955Ld03P078G01P078G071R1_052.ab1   213 
  898    BE443955Ld03P078G01P078G071F1_052.ab1   803 
Contig length: old 977, new 978

Contig length: old 978, new 978
New start: 0