No. words: 1732; after pruning: 1706


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    1    0.0 17.3 (1,1:812)  793  0.00 0.00 0.00  BE443955Ld05P078G01P078G071F1_079.ab1        2   813 (80)  C BE443955Ld05P078G01P078G071R1_079.ab1   (27)   812     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 1       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  408 nodes

 206 str. conn. components

Path
    1  C BE443955Ld05P078G01P078G071R1_079.ab1   839 
   35    BE443955Ld05P078G01P078G071F1_079.ab1     9 
   55  C BE443955Ld05P078G01P078G071R1_079.ab1   785 
   63    BE443955Ld05P078G01P078G071F1_079.ab1    37 
  487  C BE443955Ld05P078G01P078G071R1_079.ab1   353 
  559    BE443955Ld05P078G01P078G071F1_079.ab1   533 
  647  C BE443955Ld05P078G01P078G071R1_079.ab1   193 
  835    BE443955Ld05P078G01P078G071F1_079.ab1   809 
Contig length: old 919, new 919

Contig length: old 919, new 919
New start: 0