No. words: 1822; after pruning: 1796


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 15.7 (1,1:816)  793  0.00 0.00 0.12  BE443955Ld09P078G01P078G071F1_071.ab1        1   817 (96)  C BE443955Ld09P078G01P078G071R1_071.ab1   (93)   816     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  408 nodes

 206 str. conn. components

Path
    1  C BE443955Ld09P078G01P078G071R1_071.ab1   909 
  109    BE443955Ld09P078G01P078G071F1_071.ab1    16 
  593  C BE443955Ld09P078G01P078G071R1_071.ab1   317 
  601    BE443955Ld09P078G01P078G071F1_071.ab1   508 
  721  C BE443955Ld09P078G01P078G071R1_071.ab1   189 
  904    BE443955Ld09P078G01P078G071F1_071.ab1   812 
Contig length: old 1005, new 1005

Contig length: old 1005, new 1005
New start: 0