No. words: 1725; after pruning: 1699


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    3    0.0 16.5 (1,1:823)  797  0.00 0.12 0.00  BE443955Ld11P078G01P078G071F1_067.ab1        5   824 (2)  C BE443955Ld11P078G01P078G071R1_067.ab1   (78)   821     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 3       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  408 nodes

 206 str. conn. components

Path
    1  C BE443955Ld11P078G01P078G071R1_067.ab1   899 
   92    BE443955Ld11P078G01P078G071F1_067.ab1    17 
  168  C BE443955Ld11P078G01P078G071R1_067.ab1   732 
  172    BE443955Ld11P078G01P078G071F1_067.ab1    97 
  540  C BE443955Ld11P078G01P078G071R1_067.ab1   360 
  544    BE443955Ld11P078G01P078G071F1_067.ab1   469 
  552  C BE443955Ld11P078G01P078G071R1_067.ab1   348 
  588    BE443955Ld11P078G01P078G071F1_067.ab1   513 
  592  C BE443955Ld11P078G01P078G071R1_067.ab1   308 
  616    BE443955Ld11P078G01P078G071F1_067.ab1   541 
  632  C BE443955Ld11P078G01P078G071R1_067.ab1   268 
  648    BE443955Ld11P078G01P078G071F1_067.ab1   573 
  664  C BE443955Ld11P078G01P078G071R1_067.ab1   236 
Contig length: old 901, new 899

Contig length: old 899, new 899
New start: 0