No. words: 1474; after pruning: 1448


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    8    0.0 14.5 (1,1:702)  662  0.00 0.14 0.00  BE444579At01P129C03P129C091F1_060.ab1        1   695 (40)  C BE444579At01P129C03P129C091R1_060.ab1   (35)   704     9 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 8       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  346 nodes

 175 str. conn. components

Path
    1  C BE444579At01P129C03P129C091R1_060.ab1   739 
   64    BE444579At01P129C03P129C091F1_060.ab1    28 
   76  C BE444579At01P129C03P129C091R1_060.ab1   664 
   84    BE444579At01P129C03P129C091F1_060.ab1    48 
   88  C BE444579At01P129C03P129C091R1_060.ab1   652 
  108    BE444579At01P129C03P129C091F1_060.ab1    72 
  120  C BE444579At01P129C03P129C091R1_060.ab1   620 
  216    BE444579At01P129C03P129C091F1_060.ab1   180 
  580  C BE444579At01P129C03P129C091R1_060.ab1   160 
  588    BE444579At01P129C03P129C091F1_060.ab1   552 
  660  C BE444579At01P129C03P129C091R1_060.ab1    80 
  672    BE444579At01P129C03P129C091F1_060.ab1   636 
  684  C BE444579At01P129C03P129C091R1_060.ab1    56 
  696    BE444579At01P129C03P129C091F1_060.ab1   660 
Contig length: old 771, new 771

Contig length: old 771, new 771
New start: 0