No. words: 1461; after pruning: 1435


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 15.0 (1,1:692)  661  0.00 0.14 0.00  BE444579At02P129C03P129C091F1_058.ab1        1   693 (39)  C BE444579At02P129C03P129C091R1_058.ab1   (35)   694     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  344 nodes

 174 str. conn. components

Path
    1  C BE444579At02P129C03P129C091R1_058.ab1   729 
  108    BE444579At02P129C03P129C091F1_058.ab1    72 
  120  C BE444579At02P129C03P129C091R1_058.ab1   610 
  580    BE444579At02P129C03P129C091F1_058.ab1   544 
  660  C BE444579At02P129C03P129C091R1_058.ab1    70 
  672    BE444579At02P129C03P129C091F1_058.ab1   636 
  680  C BE444579At02P129C03P129C091R1_058.ab1    50 
  684    BE444579At02P129C03P129C091F1_058.ab1   648 
  692  C BE444579At02P129C03P129C091R1_058.ab1    38 
  696    BE444579At02P129C03P129C091F1_058.ab1   660 
Contig length: old 768, new 768

Contig length: old 768, new 768
New start: 0