No. words: 1689; after pruning: 1663


Histogram of relative pair offsets, for read pairs with multiple alignments:
75     4
99     2

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 17.2 (1,1:817)  788  0.49 0.12 0.00  BE444579Ld09P129C03P129C091F1_085.ab1        1   818 (22)  C BE444579Ld09P129C03P129C091R1_085.ab1   (30)   819     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  400 nodes

 202 str. conn. components

Path
    1  C BE444579Ld09P129C03P129C091R1_085.ab1   849 
   34    BE444579Ld09P129C03P129C091F1_085.ab1     4 
   38  C BE444579Ld09P129C03P129C091R1_085.ab1   812 
   51    BE444579Ld09P129C03P129C091F1_085.ab1    20 
   59  C BE444579Ld09P129C03P129C091R1_085.ab1   791 
   74    BE444579Ld09P129C03P129C091F1_085.ab1    43 
  110  C BE444579Ld09P129C03P129C091R1_085.ab1   740 
  119    BE444579Ld09P129C03P129C091F1_085.ab1    88 
  507  C BE444579Ld09P129C03P129C091R1_085.ab1   343 
  583    BE444579Ld09P129C03P129C091F1_085.ab1   552 
  639  C BE444579Ld09P129C03P129C091R1_085.ab1   211 
  679    BE444579Ld09P129C03P129C091F1_085.ab1   648 
  683  C BE444579Ld09P129C03P129C091R1_085.ab1   167 
  691    BE444579Ld09P129C03P129C091F1_085.ab1   660 
  699  C BE444579Ld09P129C03P129C091R1_085.ab1   151 
  703    BE444579Ld09P129C03P129C091F1_085.ab1   672 
  715  C BE444579Ld09P129C03P129C091R1_085.ab1   135 
  747    BE444579Ld09P129C03P129C091F1_085.ab1   716 
  751  C BE444579Ld09P129C03P129C091R1_085.ab1    99 
  755    BE444579Ld09P129C03P129C091F1_085.ab1   724 
  767  C BE444579Ld09P129C03P129C091R1_085.ab1    83 
  791    BE444579Ld09P129C03P129C091F1_085.ab1   760 
  814  C BE444579Ld09P129C03P129C091R1_085.ab1    36 
  846    BE444579Ld09P129C03P129C091F1_085.ab1   815 
Contig length: old 871, new 871

Contig length: old 871, new 871
New start: 0