No. words: 1714; after pruning: 1688


Histogram of relative pair offsets, for read pairs with multiple alignments:
75     4
99     2

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 18.6 (1,1:853)  817  0.00 0.00 0.00  BE444579Ld10P129C03P129C091F1_083.ab1        1   835 (0)  C BE444579Ld10P129C03P129C091R1_083.ab1   (25)   854    20 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  420 nodes

 212 str. conn. components

Path
    1  C BE444579Ld10P129C03P129C091R1_083.ab1   879 
   29    BE444579Ld10P129C03P129C091F1_083.ab1     4 
   57  C BE444579Ld10P129C03P129C091R1_083.ab1   823 
   61    BE444579Ld10P129C03P129C091F1_083.ab1    36 
  517  C BE444579Ld10P129C03P129C091R1_083.ab1   363 
  521    BE444579Ld10P129C03P129C091F1_083.ab1   496 
  525  C BE444579Ld10P129C03P129C091R1_083.ab1   355 
  585    BE444579Ld10P129C03P129C091F1_083.ab1   560 
  589  C BE444579Ld10P129C03P129C091R1_083.ab1   291 
  621    BE444579Ld10P129C03P129C091F1_083.ab1   596 
  629  C BE444579Ld10P129C03P129C091R1_083.ab1   251 
  653    BE444579Ld10P129C03P129C091F1_083.ab1   628 
  657  C BE444579Ld10P129C03P129C091R1_083.ab1   223 
  709    BE444579Ld10P129C03P129C091F1_083.ab1   684 
  733  C BE444579Ld10P129C03P129C091R1_083.ab1   147 
Contig length: old 879, new 879

Contig length: old 879, new 879
New start: 0