No. words: 1304; after pruning: 1222


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 13.6 (1,1:630)  589  0.80 0.16 0.00  BE444579Sn27P146A06P129C091F1_096.ab1        1   626 (0)  C BE444579Sn27P146A06P129C091R1_096.ab1   (46)   632     6 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  296 nodes

 150 str. conn. components

Path
    1  C BE444579Sn27P146A06P129C091R1_096.ab1   678 
   88    BE444579Sn27P146A06P129C091F1_096.ab1    41 
  100  C BE444579Sn27P146A06P129C091R1_096.ab1   579 
  154    BE444579Sn27P146A06P129C091F1_096.ab1   107 
  178  C BE444579Sn27P146A06P129C091R1_096.ab1   501 
  206    BE444579Sn27P146A06P129C091F1_096.ab1   159 
  210  C BE444579Sn27P146A06P129C091R1_096.ab1   469 
  306    BE444579Sn27P146A06P129C091F1_096.ab1   259 
  310  C BE444579Sn27P146A06P129C091R1_096.ab1   369 
  389    BE444579Sn27P146A06P129C091F1_096.ab1   342 
  425  C BE444579Sn27P146A06P129C091R1_096.ab1   254 
  461    BE444579Sn27P146A06P129C091F1_096.ab1   414 
  485  C BE444579Sn27P146A06P129C091R1_096.ab1   194 
  516    BE444579Sn27P146A06P129C091F1_096.ab1   469 
  520  C BE444579Sn27P146A06P129C091R1_096.ab1   159 
  565    BE444579Sn27P146A06P129C091F1_096.ab1   518 
  573  C BE444579Sn27P146A06P129C091R1_096.ab1   106 
  577    BE444579Sn27P146A06P129C091F1_096.ab1   530 
  601  C BE444579Sn27P146A06P129C091R1_096.ab1    78 
  632    BE444579Sn27P146A06P129C091F1_096.ab1   585 
  636  C BE444579Sn27P146A06P129C091R1_096.ab1    43 
Contig length: old 678, new 678

Contig length: old 678, new 678
New start: 0