No. words: 1359; after pruning: 1333


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    2    0.0 13.5 (1,1:630)  597  0.00 0.16 0.00  BE444579Sn30P146A06P129C091F1_088.ab1        1   629 (46)  C BE444579Sn30P146A06P129C091R1_088.ab1   (52)   632     3 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 2       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  314 nodes

 159 str. conn. components

Path
    1  C BE444579Sn30P146A06P129C091R1_088.ab1   684 
   60    BE444579Sn30P146A06P129C091F1_088.ab1     8 
   64  C BE444579Sn30P146A06P129C091R1_088.ab1   621 
   78    BE444579Sn30P146A06P129C091F1_088.ab1    25 
   86  C BE444579Sn30P146A06P129C091R1_088.ab1   599 
   94    BE444579Sn30P146A06P129C091F1_088.ab1    41 
  106  C BE444579Sn30P146A06P129C091R1_088.ab1   579 
  126    BE444579Sn30P146A06P129C091F1_088.ab1    73 
  134  C BE444579Sn30P146A06P129C091R1_088.ab1   551 
  158    BE444579Sn30P146A06P129C091F1_088.ab1   105 
  190  C BE444579Sn30P146A06P129C091R1_088.ab1   495 
  210    BE444579Sn30P146A06P129C091F1_088.ab1   157 
  222  C BE444579Sn30P146A06P129C091R1_088.ab1   463 
  302    BE444579Sn30P146A06P129C091F1_088.ab1   249 
  310  C BE444579Sn30P146A06P129C091R1_088.ab1   375 
  314    BE444579Sn30P146A06P129C091F1_088.ab1   261 
  322  C BE444579Sn30P146A06P129C091R1_088.ab1   363 
  398    BE444579Sn30P146A06P129C091F1_088.ab1   345 
  426  C BE444579Sn30P146A06P129C091R1_088.ab1   259 
  446    BE444579Sn30P146A06P129C091F1_088.ab1   393 
  458  C BE444579Sn30P146A06P129C091R1_088.ab1   227 
  470    BE444579Sn30P146A06P129C091F1_088.ab1   417 
  490  C BE444579Sn30P146A06P129C091R1_088.ab1   195 
  538    BE444579Sn30P146A06P129C091F1_088.ab1   485 
  542  C BE444579Sn30P146A06P129C091R1_088.ab1   143 
  550    BE444579Sn30P146A06P129C091F1_088.ab1   497 
  554  C BE444579Sn30P146A06P129C091R1_088.ab1   131 
  562    BE444579Sn30P146A06P129C091F1_088.ab1   509 
  578  C BE444579Sn30P146A06P129C091R1_088.ab1   107 
  590    BE444579Sn30P146A06P129C091F1_088.ab1   537 
  606  C BE444579Sn30P146A06P129C091R1_088.ab1    79 
  618    BE444579Sn30P146A06P129C091F1_088.ab1   565 
  626  C BE444579Sn30P146A06P129C091R1_088.ab1    59 
  638    BE444579Sn30P146A06P129C091F1_088.ab1   585 
  642  C BE444579Sn30P146A06P129C091R1_088.ab1    43 
  650    BE444579Sn30P146A06P129C091F1_088.ab1   597 
  654  C BE444579Sn30P146A06P129C091R1_088.ab1    31 
  666    BE444579Sn30P146A06P129C091F1_088.ab1   613 
Contig length: old 728, new 728

Contig length: old 728, new 728
New start: 0