No. words: 1279; after pruning: 1169


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 13.1 (1,1:605)  566  1.16 0.17 0.00  BE444579Sn31P146A06P129C091F1_092.ab1        1   606 (20)  C BE444579Sn31P146A06P129C091R1_092.ab1   (46)   607     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  282 nodes

 143 str. conn. components

Path
    1  C BE444579Sn31P146A06P129C091R1_092.ab1   653 
   54    BE444579Sn31P146A06P129C091F1_092.ab1     8 
   58  C BE444579Sn31P146A06P129C091R1_092.ab1   596 
   72    BE444579Sn31P146A06P129C091F1_092.ab1    25 
   76  C BE444579Sn31P146A06P129C091R1_092.ab1   578 
   80    BE444579Sn31P146A06P129C091F1_092.ab1    33 
  100  C BE444579Sn31P146A06P129C091R1_092.ab1   554 
  120    BE444579Sn31P146A06P129C091F1_092.ab1    73 
  136  C BE444579Sn31P146A06P129C091R1_092.ab1   518 
  144    BE444579Sn31P146A06P129C091F1_092.ab1    97 
  196  C BE444579Sn31P146A06P129C091R1_092.ab1   458 
  200    BE444579Sn31P146A06P129C091F1_092.ab1   153 
  220  C BE444579Sn31P146A06P129C091R1_092.ab1   434 
  252    BE444579Sn31P146A06P129C091F1_092.ab1   205 
  264  C BE444579Sn31P146A06P129C091R1_092.ab1   390 
  389    BE444579Sn31P146A06P129C091F1_092.ab1   342 
  429  C BE444579Sn31P146A06P129C091R1_092.ab1   225 
  437    BE444579Sn31P146A06P129C091F1_092.ab1   390 
  487  C BE444579Sn31P146A06P129C091R1_092.ab1   167 
  516    BE444579Sn31P146A06P129C091F1_092.ab1   469 
  520  C BE444579Sn31P146A06P129C091R1_092.ab1   134 
  528    BE444579Sn31P146A06P129C091F1_092.ab1   481 
  536  C BE444579Sn31P146A06P129C091R1_092.ab1   118 
  544    BE444579Sn31P146A06P129C091F1_092.ab1   497 
  548  C BE444579Sn31P146A06P129C091R1_092.ab1   106 
  585    BE444579Sn31P146A06P129C091F1_092.ab1   538 
  593  C BE444579Sn31P146A06P129C091R1_092.ab1    61 
  644    BE444579Sn31P146A06P129C091F1_092.ab1   597 
Contig length: old 673, new 673

Contig length: old 673, new 673
New start: 0