No. words: 1351; after pruning: 1311


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 13.8 (1,1:626)  595  0.16 0.16 0.00  BE444579Sn32P146A06P129C091F1_086.ab1        1   627 (47)  C BE444579Sn32P146A06P129C091R1_086.ab1   (49)   628     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  310 nodes

 157 str. conn. components

Path
    1  C BE444579Sn32P146A06P129C091R1_086.ab1   677 
   57    BE444579Sn32P146A06P129C091F1_086.ab1     8 
   61  C BE444579Sn32P146A06P129C091R1_086.ab1   617 
   75    BE444579Sn32P146A06P129C091F1_086.ab1    25 
   79  C BE444579Sn32P146A06P129C091R1_086.ab1   599 
   83    BE444579Sn32P146A06P129C091F1_086.ab1    33 
  107  C BE444579Sn32P146A06P129C091R1_086.ab1   571 
  123    BE444579Sn32P146A06P129C091F1_086.ab1    73 
  131  C BE444579Sn32P146A06P129C091R1_086.ab1   547 
  155    BE444579Sn32P146A06P129C091F1_086.ab1   105 
  183  C BE444579Sn32P146A06P129C091R1_086.ab1   495 
  203    BE444579Sn32P146A06P129C091F1_086.ab1   153 
  223  C BE444579Sn32P146A06P129C091R1_086.ab1   455 
  299    BE444579Sn32P146A06P129C091F1_086.ab1   249 
  327  C BE444579Sn32P146A06P129C091R1_086.ab1   351 
  335    BE444579Sn32P146A06P129C091F1_086.ab1   285 
  343  C BE444579Sn32P146A06P129C091R1_086.ab1   335 
  367    BE444579Sn32P146A06P129C091F1_086.ab1   317 
  379  C BE444579Sn32P146A06P129C091R1_086.ab1   299 
  391    BE444579Sn32P146A06P129C091F1_086.ab1   341 
  399  C BE444579Sn32P146A06P129C091R1_086.ab1   279 
  403    BE444579Sn32P146A06P129C091F1_086.ab1   353 
  415  C BE444579Sn32P146A06P129C091R1_086.ab1   263 
  427    BE444579Sn32P146A06P129C091F1_086.ab1   377 
  431  C BE444579Sn32P146A06P129C091R1_086.ab1   247 
  443    BE444579Sn32P146A06P129C091F1_086.ab1   393 
  455  C BE444579Sn32P146A06P129C091R1_086.ab1   223 
  467    BE444579Sn32P146A06P129C091F1_086.ab1   417 
  487  C BE444579Sn32P146A06P129C091R1_086.ab1   191 
  531    BE444579Sn32P146A06P129C091F1_086.ab1   481 
  539  C BE444579Sn32P146A06P129C091R1_086.ab1   139 
  547    BE444579Sn32P146A06P129C091F1_086.ab1   497 
  551  C BE444579Sn32P146A06P129C091R1_086.ab1   127 
  559    BE444579Sn32P146A06P129C091F1_086.ab1   509 
  579  C BE444579Sn32P146A06P129C091R1_086.ab1    99 
  595    BE444579Sn32P146A06P129C091F1_086.ab1   545 
  599  C BE444579Sn32P146A06P129C091R1_086.ab1    79 
  663    BE444579Sn32P146A06P129C091F1_086.ab1   613 
  667  C BE444579Sn32P146A06P129C091R1_086.ab1    11 
  671    BE444579Sn32P146A06P129C091F1_086.ab1   621 
Contig length: old 724, new 724

Contig length: old 724, new 724
New start: 0