No. words: 1282; after pruning: 1200


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 13.3 (1,1:605)  570  0.66 0.17 0.00  BE444579Ta12P146A06P129C091F1_095.ab1        1   606 (20)  C BE444579Ta12P146A06P129C091R1_095.ab1   (49)   607     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  292 nodes

 148 str. conn. components

Path
    1  C BE444579Ta12P146A06P129C091R1_095.ab1   656 
   57    BE444579Ta12P146A06P129C091F1_095.ab1     8 
   61  C BE444579Ta12P146A06P129C091R1_095.ab1   596 
   87    BE444579Ta12P146A06P129C091F1_095.ab1    37 
  103  C BE444579Ta12P146A06P129C091R1_095.ab1   554 
  107    BE444579Ta12P146A06P129C091F1_095.ab1    57 
  111  C BE444579Ta12P146A06P129C091R1_095.ab1   546 
  123    BE444579Ta12P146A06P129C091F1_095.ab1    73 
  131  C BE444579Ta12P146A06P129C091R1_095.ab1   526 
  151    BE444579Ta12P146A06P129C091F1_095.ab1   101 
  231  C BE444579Ta12P146A06P129C091R1_095.ab1   426 
  299    BE444579Ta12P146A06P129C091F1_095.ab1   249 
  327  C BE444579Ta12P146A06P129C091R1_095.ab1   330 
  391    BE444579Ta12P146A06P129C091F1_095.ab1   341 
  498  C BE444579Ta12P146A06P129C091R1_095.ab1   159 
  519    BE444579Ta12P146A06P129C091F1_095.ab1   469 
  523  C BE444579Ta12P146A06P129C091R1_095.ab1   134 
  527    BE444579Ta12P146A06P129C091F1_095.ab1   477 
  535  C BE444579Ta12P146A06P129C091R1_095.ab1   122 
  547    BE444579Ta12P146A06P129C091F1_095.ab1   497 
  555  C BE444579Ta12P146A06P129C091R1_095.ab1   102 
  567    BE444579Ta12P146A06P129C091F1_095.ab1   517 
  579  C BE444579Ta12P146A06P129C091R1_095.ab1    78 
  587    BE444579Ta12P146A06P129C091F1_095.ab1   537 
  607  C BE444579Ta12P146A06P129C091R1_095.ab1    50 
  619    BE444579Ta12P146A06P129C091F1_095.ab1   569 
  623  C BE444579Ta12P146A06P129C091R1_095.ab1    34 
  631    BE444579Ta12P146A06P129C091F1_095.ab1   581 
  639  C BE444579Ta12P146A06P129C091R1_095.ab1    18 
  647    BE444579Ta12P146A06P129C091F1_095.ab1   597 
Contig length: old 676, new 676

Contig length: old 676, new 676
New start: 0