No. words: 1356; after pruning: 1330


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 13.7 (1,1:620)  590  0.00 0.16 0.00  BE444579Ta15P146A06P129C091F1_076.ab1        1   621 (55)  C BE444579Ta15P146A06P129C091R1_076.ab1   (58)   622     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  306 nodes

 155 str. conn. components

Path
    1  C BE444579Ta15P146A06P129C091R1_076.ab1   680 
   78    BE444579Ta15P146A06P129C091F1_076.ab1    19 
   82  C BE444579Ta15P146A06P129C091R1_076.ab1   599 
   86    BE444579Ta15P146A06P129C091F1_076.ab1    27 
  106  C BE444579Ta15P146A06P129C091R1_076.ab1   575 
  126    BE444579Ta15P146A06P129C091F1_076.ab1    67 
  134  C BE444579Ta15P146A06P129C091R1_076.ab1   547 
  158    BE444579Ta15P146A06P129C091F1_076.ab1    99 
  182  C BE444579Ta15P146A06P129C091R1_076.ab1   499 
  210    BE444579Ta15P146A06P129C091F1_076.ab1   151 
  222  C BE444579Ta15P146A06P129C091R1_076.ab1   459 
  274    BE444579Ta15P146A06P129C091F1_076.ab1   215 
  322  C BE444579Ta15P146A06P129C091R1_076.ab1   359 
  394    BE444579Ta15P146A06P129C091F1_076.ab1   335 
  490  C BE444579Ta15P146A06P129C091R1_076.ab1   191 
  494    BE444579Ta15P146A06P129C091F1_076.ab1   435 
  514  C BE444579Ta15P146A06P129C091R1_076.ab1   167 
  522    BE444579Ta15P146A06P129C091F1_076.ab1   463 
  554  C BE444579Ta15P146A06P129C091R1_076.ab1   127 
  562    BE444579Ta15P146A06P129C091F1_076.ab1   503 
  582  C BE444579Ta15P146A06P129C091R1_076.ab1    99 
  590    BE444579Ta15P146A06P129C091F1_076.ab1   531 
  606  C BE444579Ta15P146A06P129C091R1_076.ab1    75 
  626    BE444579Ta15P146A06P129C091F1_076.ab1   567 
  634  C BE444579Ta15P146A06P129C091R1_076.ab1    47 
  638    BE444579Ta15P146A06P129C091F1_076.ab1   579 
  642  C BE444579Ta15P146A06P129C091R1_076.ab1    39 
  650    BE444579Ta15P146A06P129C091F1_076.ab1   591 
  654  C BE444579Ta15P146A06P129C091R1_076.ab1    27 
  662    BE444579Ta15P146A06P129C091F1_076.ab1   603 
Contig length: old 735, new 735

Contig length: old 735, new 735
New start: 0