No. words: 1309; after pruning: 1269


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 13.8 (1,1:630)  594  0.16 0.16 0.00  BE444579Ta16P146A06P129C091F1_091.ab1        1   626 (0)  C BE444579Ta16P146A06P129C091R1_091.ab1   (51)   632     6 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  310 nodes

 157 str. conn. components

Path
    1  C BE444579Ta16P146A06P129C091R1_091.ab1   683 
   59    BE444579Ta16P146A06P129C091F1_091.ab1     8 
   63  C BE444579Ta16P146A06P129C091R1_091.ab1   621 
   77    BE444579Ta16P146A06P129C091F1_091.ab1    25 
   89  C BE444579Ta16P146A06P129C091R1_091.ab1   595 
   93    BE444579Ta16P146A06P129C091F1_091.ab1    41 
  105  C BE444579Ta16P146A06P129C091R1_091.ab1   579 
  125    BE444579Ta16P146A06P129C091F1_091.ab1    73 
  137  C BE444579Ta16P146A06P129C091R1_091.ab1   547 
  157    BE444579Ta16P146A06P129C091F1_091.ab1   105 
  197  C BE444579Ta16P146A06P129C091R1_091.ab1   487 
  209    BE444579Ta16P146A06P129C091F1_091.ab1   157 
  217  C BE444579Ta16P146A06P129C091R1_091.ab1   467 
  333    BE444579Ta16P146A06P129C091F1_091.ab1   281 
  349  C BE444579Ta16P146A06P129C091R1_091.ab1   335 
  397    BE444579Ta16P146A06P129C091F1_091.ab1   345 
  433  C BE444579Ta16P146A06P129C091R1_091.ab1   251 
  445    BE444579Ta16P146A06P129C091F1_091.ab1   393 
  457  C BE444579Ta16P146A06P129C091R1_091.ab1   227 
  473    BE444579Ta16P146A06P129C091F1_091.ab1   421 
  489  C BE444579Ta16P146A06P129C091R1_091.ab1   195 
  549    BE444579Ta16P146A06P129C091F1_091.ab1   497 
  553  C BE444579Ta16P146A06P129C091R1_091.ab1   131 
  561    BE444579Ta16P146A06P129C091F1_091.ab1   509 
  581  C BE444579Ta16P146A06P129C091R1_091.ab1   103 
  589    BE444579Ta16P146A06P129C091F1_091.ab1   537 
  597  C BE444579Ta16P146A06P129C091R1_091.ab1    87 
  637    BE444579Ta16P146A06P129C091F1_091.ab1   585 
  641  C BE444579Ta16P146A06P129C091R1_091.ab1    43 
  657    BE444579Ta16P146A06P129C091F1_091.ab1   605 
  669  C BE444579Ta16P146A06P129C091R1_091.ab1    15 
Contig length: old 683, new 683

Contig length: old 683, new 683
New start: 0