No. words: 1357; after pruning: 1317


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    2    0.0 13.2 (1,1:630)  596  0.16 0.16 0.00  BE444579Ta17P146A06P129C091F1_074.ab1        1   629 (45)  C BE444579Ta17P146A06P129C091R1_074.ab1   (51)   632     3 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 2       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  312 nodes

 158 str. conn. components

Path
    1  C BE444579Ta17P146A06P129C091R1_074.ab1   683 
   59    BE444579Ta17P146A06P129C091F1_074.ab1     8 
   63  C BE444579Ta17P146A06P129C091R1_074.ab1   621 
   81    BE444579Ta17P146A06P129C091F1_074.ab1    29 
   85  C BE444579Ta17P146A06P129C091R1_074.ab1   599 
   93    BE444579Ta17P146A06P129C091F1_074.ab1    41 
  109  C BE444579Ta17P146A06P129C091R1_074.ab1   575 
  125    BE444579Ta17P146A06P129C091F1_074.ab1    73 
  133  C BE444579Ta17P146A06P129C091R1_074.ab1   551 
  157    BE444579Ta17P146A06P129C091F1_074.ab1   105 
  181  C BE444579Ta17P146A06P129C091R1_074.ab1   503 
  185    BE444579Ta17P146A06P129C091F1_074.ab1   133 
  201  C BE444579Ta17P146A06P129C091R1_074.ab1   483 
  209    BE444579Ta17P146A06P129C091F1_074.ab1   157 
  225  C BE444579Ta17P146A06P129C091R1_074.ab1   459 
  305    BE444579Ta17P146A06P129C091F1_074.ab1   253 
  317  C BE444579Ta17P146A06P129C091R1_074.ab1   367 
  393    BE444579Ta17P146A06P129C091F1_074.ab1   341 
  457  C BE444579Ta17P146A06P129C091R1_074.ab1   227 
  465    BE444579Ta17P146A06P129C091F1_074.ab1   413 
  489  C BE444579Ta17P146A06P129C091R1_074.ab1   195 
  533    BE444579Ta17P146A06P129C091F1_074.ab1   481 
  541  C BE444579Ta17P146A06P129C091R1_074.ab1   143 
  549    BE444579Ta17P146A06P129C091F1_074.ab1   497 
  609  C BE444579Ta17P146A06P129C091R1_074.ab1    75 
  633    BE444579Ta17P146A06P129C091F1_074.ab1   581 
  641  C BE444579Ta17P146A06P129C091R1_074.ab1    43 
  673    BE444579Ta17P146A06P129C091F1_074.ab1   621 
Contig length: old 726, new 726

Contig length: old 726, new 726
New start: 0