No. words: 1453; after pruning: 1427


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 14.1 (1,1:692)  654  0.00 0.14 0.14  BE444579Tu01P129C03P129C091F1_051.ab1        1   693 (33)  C BE444579Tu01P129C03P129C091R1_051.ab1   (34)   693     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  344 nodes

 174 str. conn. components

Path
    1  C BE444579Tu01P129C03P129C091R1_051.ab1   727 
  112    BE444579Tu01P129C03P129C091F1_051.ab1    77 
  116  C BE444579Tu01P129C03P129C091R1_051.ab1   612 
  144    BE444579Tu01P129C03P129C091F1_051.ab1   109 
  164  C BE444579Tu01P129C03P129C091R1_051.ab1   564 
  328    BE444579Tu01P129C03P129C091F1_051.ab1   293 
  648  C BE444579Tu01P129C03P129C091R1_051.ab1    80 
  660    BE444579Tu01P129C03P129C091F1_051.ab1   625 
  680  C BE444579Tu01P129C03P129C091R1_051.ab1    48 
  684    BE444579Tu01P129C03P129C091F1_051.ab1   649 
Contig length: old 760, new 761

Contig length: old 761, new 761
New start: 0