No. words: 1472; after pruning: 1446


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 12.1 (1,1:920)  524  0.00 0.18 0.00  BE444864Ld04P003E02E08F1_040.ab1      164   713 (0)  C BE444864Ld04P003E02E08R1_040.ab1   (0)   759   209 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  274 nodes

 139 str. conn. components

Path
    1    BE444864Ld04P003E02E08F1_040.ab1     1 
  359  C BE444864Ld04P003E02E08R1_040.ab1   564 
  363    BE444864Ld04P003E02E08F1_040.ab1   363 
  499  C BE444864Ld04P003E02E08R1_040.ab1   424 
  503    BE444864Ld04P003E02E08F1_040.ab1   503 
  527  C BE444864Ld04P003E02E08R1_040.ab1   396 
  531    BE444864Ld04P003E02E08F1_040.ab1   531 
  539  C BE444864Ld04P003E02E08R1_040.ab1   384 
  543    BE444864Ld04P003E02E08F1_040.ab1   543 
  547  C BE444864Ld04P003E02E08R1_040.ab1   376 
  583    BE444864Ld04P003E02E08F1_040.ab1   583 
  587  C BE444864Ld04P003E02E08R1_040.ab1   336 
  615    BE444864Ld04P003E02E08F1_040.ab1   615 
  619  C BE444864Ld04P003E02E08R1_040.ab1   304 
Contig length: old 921, new 922

Contig length: old 922, new 922
New start: 0