No. words: 1456; after pruning: 1430


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 9.8 (1,1:920)  496  0.56 0.19 0.19  BE444864Ld05P003E02E08F1_052.ab1      177   711 (0)  C BE444864Ld05P003E02E08R1_052.ab1   (0)   745   211 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  254 nodes

 129 str. conn. components

Path
    1    BE444864Ld05P003E02E08F1_052.ab1     1 
  458  C BE444864Ld05P003E02E08R1_052.ab1   464 
  482    BE444864Ld05P003E02E08F1_052.ab1   482 
  494  C BE444864Ld05P003E02E08R1_052.ab1   428 
  506    BE444864Ld05P003E02E08F1_052.ab1   506 
  510  C BE444864Ld05P003E02E08R1_052.ab1   412 
Contig length: old 921, new 921

Contig length: old 921, new 921
New start: 0