No. words: 723; after pruning: 697


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    

Pass: 3
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 4
             Gap  Score    
Merge:(0)    0   -2.1 -2.1 (1,1:510)  122 13.68 0.00 0.00  BE444864Ta13P026C06P003E081F1_039.ab1      144   355 (0)  C BE444864Ta13P026C06P003E081R1_039.ab1   (0)   368   157 *

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
-2.1       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Read equivalence class histogram:
    1    2

Chimera merges: 


Contig 1:  52 nodes

 28 str. conn. components

Path
    1    BE444864Ta13P026C06P003E081F1_039.ab1     1 
  160  C BE444864Ta13P026C06P003E081R1_039.ab1   352 
  226    BE444864Ta13P026C06P003E081F1_039.ab1   226 
  230  C BE444864Ta13P026C06P003E081R1_039.ab1   282 
Contig length: old 511, new 511

Contig length: old 511, new 511
New start: 0 
S Change at: 150; seg lengths: entry 7, contig 7
S Change at: 347; seg lengths: entry 1, contig 1