No. words: 1189; after pruning: 1163


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 12.2 (1,1:548)  528  0.00 0.00 0.00  BE444864Ta17P026H05P003E081F1_095.ab1        1   549 (44)  C BE444864Ta17P026H05P003E081R1_095.ab1   (47)   549     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  276 nodes

 140 str. conn. components

Path
    1  C BE444864Ta17P026H05P003E081R1_095.ab1   596 
  139    BE444864Ta17P026H05P003E081F1_095.ab1    92 
  147  C BE444864Ta17P026H05P003E081R1_095.ab1   450 
  411    BE444864Ta17P026H05P003E081F1_095.ab1   364 
  427  C BE444864Ta17P026H05P003E081R1_095.ab1   170 
  447    BE444864Ta17P026H05P003E081F1_095.ab1   400 
  451  C BE444864Ta17P026H05P003E081R1_095.ab1   146 
  491    BE444864Ta17P026H05P003E081F1_095.ab1   444 
  515  C BE444864Ta17P026H05P003E081R1_095.ab1    82 
  563    BE444864Ta17P026H05P003E081F1_095.ab1   516 
Contig length: old 640, new 640

Contig length: old 640, new 640
New start: 0