No. words: 1186; after pruning: 1160


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 12.1 (1,1:547)  523  0.00 0.18 0.00  BE444864Td01P026H05P003E081F1_079.ab1        1   548 (44)  C BE444864Td01P026H05P003E081R1_079.ab1   (45)   549     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  272 nodes

 138 str. conn. components

Path
    1  C BE444864Td01P026H05P003E081R1_079.ab1   594 
  122    BE444864Td01P026H05P003E081F1_079.ab1    76 
  178  C BE444864Td01P026H05P003E081R1_079.ab1   417 
  410    BE444864Td01P026H05P003E081F1_079.ab1   364 
  414  C BE444864Td01P026H05P003E081R1_079.ab1   181 
  466    BE444864Td01P026H05P003E081F1_079.ab1   420 
  470  C BE444864Td01P026H05P003E081R1_079.ab1   125 
  490    BE444864Td01P026H05P003E081F1_079.ab1   444 
  514  C BE444864Td01P026H05P003E081R1_079.ab1    81 
  546    BE444864Td01P026H05P003E081F1_079.ab1   500 
  558  C BE444864Td01P026H05P003E081R1_079.ab1    37 
  562    BE444864Td01P026H05P003E081F1_079.ab1   516 
Contig length: old 638, new 638

Contig length: old 638, new 638
New start: 0