No. words: 1200; after pruning: 1174


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    4    0.0 11.1 (1,1:561)  537  0.00 0.00 0.00  BE444864Td02P026H05P003E081F1_077.ab1        5   562 (43)  C BE444864Td02P026H05P003E081R1_077.ab1   (37)   558     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 4       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  280 nodes

 142 str. conn. components

Path
    1  C BE444864Td02P026H05P003E081R1_077.ab1   595 
  125    BE444864Td02P026H05P003E081F1_077.ab1    92 
  129  C BE444864Td02P026H05P003E081R1_077.ab1   467 
  141    BE444864Td02P026H05P003E081F1_077.ab1   108 
  153  C BE444864Td02P026H05P003E081R1_077.ab1   443 
  361    BE444864Td02P026H05P003E081F1_077.ab1   328 
  369  C BE444864Td02P026H05P003E081R1_077.ab1   227 
  393    BE444864Td02P026H05P003E081F1_077.ab1   360 
  421  C BE444864Td02P026H05P003E081R1_077.ab1   175 
  445    BE444864Td02P026H05P003E081F1_077.ab1   412 
  457  C BE444864Td02P026H05P003E081R1_077.ab1   139 
  489    BE444864Td02P026H05P003E081F1_077.ab1   456 
  513  C BE444864Td02P026H05P003E081R1_077.ab1    83 
  561    BE444864Td02P026H05P003E081F1_077.ab1   528 
Contig length: old 638, new 638

Contig length: old 638, new 638
New start: 0