No. words: 1081; after pruning: 1055


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    8    0.0 10.2 (1,1:503)  468  0.81 0.00 0.00  BE444864Td06P026A06P003E081F1_069.ab1        1   496 (31)  C BE444864Td06P026A06P003E081R1_069.ab1   (50)   504     9 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 8       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  244 nodes

 124 str. conn. components

Path
    1  C BE444864Td06P026A06P003E081R1_069.ab1   554 
  134    BE444864Td06P026A06P003E081F1_069.ab1    84 
  142  C BE444864Td06P026A06P003E081R1_069.ab1   413 
  242    BE444864Td06P026A06P003E081F1_069.ab1   192 
  482  C BE444864Td06P026A06P003E081R1_069.ab1    73 
  541    BE444864Td06P026A06P003E081F1_069.ab1   491 
Contig length: old 577, new 577

Contig length: old 577, new 577
New start: 0