No. words: 1384; after pruning: 1358


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 3.8 (1,1:1193)  181  1.58 0.00 0.00  BE444961At01P016D03P016D091F1_048.ab1      427   616 (0)  C BE444961At01P016D03P016D091R1_048.ab1   (0)   768   579 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  88 nodes

 46 str. conn. components

Path
    1    BE444961At01P016D03P016D091F1_048.ab1     1 
  450  C BE444961At01P016D03P016D091R1_048.ab1   745 
  454    BE444961At01P016D03P016D091F1_048.ab1   454 
  462  C BE444961At01P016D03P016D091R1_048.ab1   733 
  466    BE444961At01P016D03P016D091F1_048.ab1   466 
  482  C BE444961At01P016D03P016D091R1_048.ab1   713 
  490    BE444961At01P016D03P016D091F1_048.ab1   490 
  502  C BE444961At01P016D03P016D091R1_048.ab1   693 
Contig length: old 1194, new 1194

Contig length: old 1194, new 1194
New start: 0