No. words: 1320; after pruning: 1294


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    9    0.0 11.7 (1,1:631)  609  0.16 0.00 0.00  BE445287Ta13P068G09P019B111F1_039.ab1        1   623 (31)  C BE445287Ta13P068G09P019B111R1_039.ab1   (34)   632    10 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 9       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  310 nodes

 157 str. conn. components

Path
    1  C BE445287Ta13P068G09P019B111R1_039.ab1   666 
   43    BE445287Ta13P068G09P019B111F1_039.ab1     9 
  139  C BE445287Ta13P068G09P019B111R1_039.ab1   528 
  143    BE445287Ta13P068G09P019B111F1_039.ab1   109 
  171  C BE445287Ta13P068G09P019B111R1_039.ab1   496 
  175    BE445287Ta13P068G09P019B111F1_039.ab1   141 
  463  C BE445287Ta13P068G09P019B111R1_039.ab1   204 
  467    BE445287Ta13P068G09P019B111F1_039.ab1   433 
  495  C BE445287Ta13P068G09P019B111R1_039.ab1   172 
  519    BE445287Ta13P068G09P019B111F1_039.ab1   485 
  523  C BE445287Ta13P068G09P019B111R1_039.ab1   144 
  639    BE445287Ta13P068G09P019B111F1_039.ab1   605 
Contig length: old 688, new 688

Contig length: old 688, new 688
New start: 0