No. words: 1132; after pruning: 1106


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)   11    0.0 3.2 (1,1:627)  417  3.38 0.00 0.00  BE445287Ta16P068G09P019B111F1_033.ab1      145   617 (28)  C BE445287Ta16P068G09P019B111R1_033.ab1   (3)   484    12 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
11       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  204 nodes

 104 str. conn. components

Path
    1    BE445287Ta16P068G09P019B111F1_033.ab1     1 
  464  C BE445287Ta16P068G09P019B111R1_033.ab1   165 
  484    BE445287Ta16P068G09P019B111F1_033.ab1   484 
  492  C BE445287Ta16P068G09P019B111R1_033.ab1   137 
  528    BE445287Ta16P068G09P019B111F1_033.ab1   528 
  532  C BE445287Ta16P068G09P019B111R1_033.ab1    97 
  568    BE445287Ta16P068G09P019B111F1_033.ab1   568 
  577  C BE445287Ta16P068G09P019B111R1_033.ab1    52 
  613    BE445287Ta16P068G09P019B111F1_033.ab1   613 
Contig length: old 645, new 645

Contig length: old 645, new 645
New start: 0