No. words: 1326; after pruning: 1300


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    9    0.0 11.8 (1,1:636)  614  0.16 0.00 0.00  BE445287Ta18P068G09P019B111F1_046.ab1        1   628 (31)  C BE445287Ta18P068G09P019B111R1_046.ab1   (30)   637    10 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 9       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  312 nodes

 158 str. conn. components

Path
    1  C BE445287Ta18P068G09P019B111R1_046.ab1   667 
   48    BE445287Ta18P068G09P019B111F1_046.ab1    18 
   76  C BE445287Ta18P068G09P019B111R1_046.ab1   592 
   84    BE445287Ta18P068G09P019B111F1_046.ab1    54 
  156  C BE445287Ta18P068G09P019B111R1_046.ab1   512 
  160    BE445287Ta18P068G09P019B111F1_046.ab1   130 
  432  C BE445287Ta18P068G09P019B111R1_046.ab1   236 
  440    BE445287Ta18P068G09P019B111F1_046.ab1   410 
  464  C BE445287Ta18P068G09P019B111R1_046.ab1   204 
  468    BE445287Ta18P068G09P019B111F1_046.ab1   438 
  516  C BE445287Ta18P068G09P019B111R1_046.ab1   152 
  520    BE445287Ta18P068G09P019B111F1_046.ab1   490 
  524  C BE445287Ta18P068G09P019B111R1_046.ab1   144 
  564    BE445287Ta18P068G09P019B111F1_046.ab1   534 
  576  C BE445287Ta18P068G09P019B111R1_046.ab1    92 
  628    BE445287Ta18P068G09P019B111F1_046.ab1   598 
  632  C BE445287Ta18P068G09P019B111R1_046.ab1    36 
  640    BE445287Ta18P068G09P019B111F1_046.ab1   610 
Contig length: old 689, new 689

Contig length: old 689, new 689
New start: 0