No. words: 1320; after pruning: 1294


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    9    0.0 9.2 (1,1:632)  604  0.16 0.00 0.00  BE445287Ta20P068G09P019B111F1_042.ab1        6   624 (32)  C BE445287Ta20P068G09P019B111R1_042.ab1   (36)   628    10 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 9       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  308 nodes

 156 str. conn. components

Path
    1  C BE445287Ta20P068G09P019B111R1_042.ab1   664 
   40    BE445287Ta20P068G09P019B111F1_042.ab1     9 
  529  C BE445287Ta20P068G09P019B111R1_042.ab1   136 
  641    BE445287Ta20P068G09P019B111F1_042.ab1   610 
  645  C BE445287Ta20P068G09P019B111R1_042.ab1    20 
  649    BE445287Ta20P068G09P019B111F1_042.ab1   618 
Contig length: old 687, new 687

Contig length: old 687, new 687
New start: 0