No. words: 1309; after pruning: 1283


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 10.0 (1,1:792)  493  0.39 0.39 0.00  BE445287Td04P068D09P019B111F1_009.ab1      160   674 (0)  C BE445287Td04P068D09P019B111R1_009.ab1   (0)   635   119 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  246 nodes

 125 str. conn. components

Path
    1    BE445287Td04P068D09P019B111F1_009.ab1     1 
  236  C BE445287Td04P068D09P019B111R1_009.ab1   559 
  248    BE445287Td04P068D09P019B111F1_009.ab1   248 
  252  C BE445287Td04P068D09P019B111R1_009.ab1   543 
  256    BE445287Td04P068D09P019B111F1_009.ab1   256 
  268  C BE445287Td04P068D09P019B111R1_009.ab1   527 
  280    BE445287Td04P068D09P019B111F1_009.ab1   280 
  284  C BE445287Td04P068D09P019B111R1_009.ab1   511 
  304    BE445287Td04P068D09P019B111F1_009.ab1   304 
  308  C BE445287Td04P068D09P019B111R1_009.ab1   487 
  336    BE445287Td04P068D09P019B111F1_009.ab1   336 
  340  C BE445287Td04P068D09P019B111R1_009.ab1   455 
  424    BE445287Td04P068D09P019B111F1_009.ab1   424 
  428  C BE445287Td04P068D09P019B111R1_009.ab1   367 
Contig length: old 793, new 794

Contig length: old 794, new 794
New start: 0 
S Change at: 164; seg lengths: entry 1, contig 1