No. words: 1311; after pruning: 1285


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 13.6 (1,1:624)  610  0.16 0.00 0.00  BE445287Td04P068G09P019B111F1_026.ab1        1   625 (34)  C BE445287Td04P068G09P019B111R1_026.ab1   (27)   625     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  312 nodes

 158 str. conn. components

Path
    1  C BE445287Td04P068G09P019B111R1_026.ab1   652 
   45    BE445287Td04P068G09P019B111F1_026.ab1    18 
  153  C BE445287Td04P068G09P019B111R1_026.ab1   500 
  157    BE445287Td04P068G09P019B111F1_026.ab1   130 
  169  C BE445287Td04P068G09P019B111R1_026.ab1   484 
  173    BE445287Td04P068G09P019B111F1_026.ab1   146 
  533  C BE445287Td04P068G09P019B111R1_026.ab1   120 
  561    BE445287Td04P068G09P019B111F1_026.ab1   534 
  569  C BE445287Td04P068G09P019B111R1_026.ab1    84 
  609    BE445287Td04P068G09P019B111F1_026.ab1   582 
  629  C BE445287Td04P068G09P019B111R1_026.ab1    24 
  637    BE445287Td04P068G09P019B111F1_026.ab1   610 
Contig length: old 686, new 686

Contig length: old 686, new 686
New start: 0