No. words: 1568; after pruning: 1542


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    4    0.0 0.6 (1,1:815)  638  0.80 1.47 0.94  BE445287Td09P068D09P019B111F1_016.ab1       53   798 (2)  C BE445287Td09P068D09P019B111R1_016.ab1   (9)   759    10 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 4       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  308 nodes

 156 str. conn. components

Path
    1    BE445287Td09P068D09P019B111F1_016.ab1     1 
  488  C BE445287Td09P068D09P019B111R1_016.ab1   330 
  508    BE445287Td09P068D09P019B111F1_016.ab1   508 
  512  C BE445287Td09P068D09P019B111R1_016.ab1   306 
Contig length: old 816, new 817

Contig length: old 817, new 817
New start: 0 
S Change at: 805; seg lengths: entry 1, contig 1