No. words: 1312; after pruning: 1286


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    9    0.0 11.8 (1,1:636)  604  0.16 0.16 0.16  BE445287Td09P068G09P019B111F1_047.ab1        1   627 (35)  C BE445287Td09P068G09P019B111R1_047.ab1   (14)   636    10 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 9       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  304 nodes

 154 str. conn. components

Path
    1  C BE445287Td09P068G09P019B111R1_047.ab1   650 
   28    BE445287Td09P068G09P019B111F1_047.ab1    14 
  193  C BE445287Td09P068G09P019B111R1_047.ab1   458 
  217    BE445287Td09P068G09P019B111F1_047.ab1   203 
  413  C BE445287Td09P068G09P019B111R1_047.ab1   238 
  433    BE445287Td09P068G09P019B111F1_047.ab1   419 
  445  C BE445287Td09P068G09P019B111R1_047.ab1   206 
  465    BE445287Td09P068G09P019B111F1_047.ab1   451 
  469  C BE445287Td09P068G09P019B111R1_047.ab1   182 
  477    BE445287Td09P068G09P019B111F1_047.ab1   463 
  481  C BE445287Td09P068G09P019B111R1_047.ab1   170 
  621    BE445287Td09P068G09P019B111F1_047.ab1   607 
Contig length: old 675, new 676

Contig length: old 676, new 676
New start: 0