No. words: 1360; after pruning: 1334


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 11.3 (1,1:513)  507  0.19 0.00 0.00  BE445328Ld01P129H03P129H091F1_032.ab1        1   514 (152)  C BE445328Ld01P129H03P129H091R1_032.ab1   (180)   514     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  254 nodes

 129 str. conn. components

Path
    1  C BE445328Ld01P129H03P129H091R1_032.ab1   694 
  248    BE445328Ld01P129H03P129H091F1_032.ab1    68 
  252  C BE445328Ld01P129H03P129H091R1_032.ab1   443 
  288    BE445328Ld01P129H03P129H091F1_032.ab1   108 
  292  C BE445328Ld01P129H03P129H091R1_032.ab1   403 
  368    BE445328Ld01P129H03P129H091F1_032.ab1   188 
  500  C BE445328Ld01P129H03P129H091R1_032.ab1   195 
  536    BE445328Ld01P129H03P129H091F1_032.ab1   356 
  552  C BE445328Ld01P129H03P129H091R1_032.ab1   143 
  580    BE445328Ld01P129H03P129H091F1_032.ab1   400 
  588  C BE445328Ld01P129H03P129H091R1_032.ab1   107 
  592    BE445328Ld01P129H03P129H091F1_032.ab1   412 
  612  C BE445328Ld01P129H03P129H091R1_032.ab1    83 
  616    BE445328Ld01P129H03P129H091F1_032.ab1   436 
  624  C BE445328Ld01P129H03P129H091R1_032.ab1    71 
  628    BE445328Ld01P129H03P129H091F1_032.ab1   448 
Contig length: old 846, new 846

Contig length: old 846, new 846
New start: 0