No. words: 1383; after pruning: 1357


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    4    0.0 11.3 (1,1:529)  521  0.00 0.00 0.00  BE445328Ld02P129H03P129H091F1_030.ab1        1   526 (151)  C BE445328Ld02P129H03P129H091R1_030.ab1   (176)   530     5 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 4       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  264 nodes

 134 str. conn. components

Path
    1  C BE445328Ld02P129H03P129H091R1_030.ab1   706 
  224    BE445328Ld02P129H03P129H091F1_030.ab1    48 
  228  C BE445328Ld02P129H03P129H091R1_030.ab1   479 
  296    BE445328Ld02P129H03P129H091F1_030.ab1   120 
  300  C BE445328Ld02P129H03P129H091R1_030.ab1   407 
  376    BE445328Ld02P129H03P129H091F1_030.ab1   200 
  388  C BE445328Ld02P129H03P129H091R1_030.ab1   319 
  432    BE445328Ld02P129H03P129H091F1_030.ab1   256 
  524  C BE445328Ld02P129H03P129H091R1_030.ab1   183 
  528    BE445328Ld02P129H03P129H091F1_030.ab1   352 
  536  C BE445328Ld02P129H03P129H091R1_030.ab1   171 
  544    BE445328Ld02P129H03P129H091F1_030.ab1   368 
  560  C BE445328Ld02P129H03P129H091R1_030.ab1   147 
  580    BE445328Ld02P129H03P129H091F1_030.ab1   404 
  584  C BE445328Ld02P129H03P129H091R1_030.ab1   123 
  588    BE445328Ld02P129H03P129H091F1_030.ab1   412 
Contig length: old 853, new 853

Contig length: old 853, new 853
New start: 0