No. words: 1581; after pruning: 1555


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 13.7 (1,1:666)  620  0.90 0.15 0.00  BE445328Ld04P129E03P129E091F1_065.ab1        1   666 (92)  C BE445328Ld04P129E03P129E091R1_065.ab1   (156)   667     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  320 nodes

 162 str. conn. components

Path
    1  C BE445328Ld04P129E03P129E091R1_065.ab1   823 
  215    BE445328Ld04P129E03P129E091F1_065.ab1    59 
  243  C BE445328Ld04P129E03P129E091R1_065.ab1   581 
  247    BE445328Ld04P129E03P129E091F1_065.ab1    91 
  283  C BE445328Ld04P129E03P129E091R1_065.ab1   541 
  295    BE445328Ld04P129E03P129E091F1_065.ab1   139 
  351  C BE445328Ld04P129E03P129E091R1_065.ab1   473 
  355    BE445328Ld04P129E03P129E091F1_065.ab1   199 
  375  C BE445328Ld04P129E03P129E091R1_065.ab1   449 
  395    BE445328Ld04P129E03P129E091F1_065.ab1   239 
  427  C BE445328Ld04P129E03P129E091R1_065.ab1   397 
  443    BE445328Ld04P129E03P129E091F1_065.ab1   287 
  527  C BE445328Ld04P129E03P129E091R1_065.ab1   297 
  551    BE445328Ld04P129E03P129E091F1_065.ab1   395 
  563  C BE445328Ld04P129E03P129E091R1_065.ab1   261 
  579    BE445328Ld04P129E03P129E091F1_065.ab1   423 
  595  C BE445328Ld04P129E03P129E091R1_065.ab1   229 
  695    BE445328Ld04P129E03P129E091F1_065.ab1   539 
  699  C BE445328Ld04P129E03P129E091R1_065.ab1   125 
  707    BE445328Ld04P129E03P129E091F1_065.ab1   551 
  719  C BE445328Ld04P129E03P129E091R1_065.ab1   105 
  743    BE445328Ld04P129E03P129E091F1_065.ab1   587 
Contig length: old 914, new 914

Contig length: old 914, new 914
New start: 0