No. words: 1437; after pruning: 1411


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 11.9 (1,1:583)  533  1.20 0.00 0.17  BE445328Ld05P129E03P129E091F1_080.ab1        1   584 (110)  C BE445328Ld05P129E03P129E091R1_080.ab1   (160)   583     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  264 nodes

 134 str. conn. components

Path
    1  C BE445328Ld05P129E03P129E091R1_080.ab1   743 
  541    BE445328Ld05P129E03P129E091F1_080.ab1   382 
  545  C BE445328Ld05P129E03P129E091R1_080.ab1   199 
  593    BE445328Ld05P129E03P129E091F1_080.ab1   434 
  597  C BE445328Ld05P129E03P129E091R1_080.ab1   147 
  617    BE445328Ld05P129E03P129E091F1_080.ab1   458 
  621  C BE445328Ld05P129E03P129E091R1_080.ab1   123 
  637    BE445328Ld05P129E03P129E091F1_080.ab1   478 
  645  C BE445328Ld05P129E03P129E091R1_080.ab1    99 
  657    BE445328Ld05P129E03P129E091F1_080.ab1   498 
  665  C BE445328Ld05P129E03P129E091R1_080.ab1    79 
  669    BE445328Ld05P129E03P129E091F1_080.ab1   510 
Contig length: old 853, new 853

Contig length: old 853, new 853
New start: 0