No. words: 1368; after pruning: 1342


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 11.2 (1,1:513)  504  0.39 0.00 0.00  BE445328Ld05P129H03P129H091F1_024.ab1        1   514 (153)  C BE445328Ld05P129H03P129H091R1_024.ab1   (187)   514     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  252 nodes

 128 str. conn. components

Path
    1  C BE445328Ld05P129H03P129H091R1_024.ab1   701 
  467    BE445328Ld05P129H03P129H091F1_024.ab1   280 
  507  C BE445328Ld05P129H03P129H091R1_024.ab1   195 
  543    BE445328Ld05P129H03P129H091F1_024.ab1   356 
  551  C BE445328Ld05P129H03P129H091R1_024.ab1   151 
  595    BE445328Ld05P129H03P129H091F1_024.ab1   408 
  631  C BE445328Ld05P129H03P129H091R1_024.ab1    71 
  635    BE445328Ld05P129H03P129H091F1_024.ab1   448 
Contig length: old 854, new 854

Contig length: old 854, new 854
New start: 0